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NA-MIC/Projects/Collaboration/UWA-Perth-NAMICWikidocument.documentElement.className=document.documentElement.className.replace(/(^|\s)client-nojs(\s|$)/,"$1client-js$2");(window.RLQ=window.RLQ||[]).push(function(){mw.config.set({"wgCanonicalNamespace":"","wgCanonicalSpecialPageName":false,"wgNamespaceNumber":0,"wgPageName":"NA-MIC/Projects/Collaboration/UWA-Perth","wgTitle":"NA-MIC/Projects/Collaboration/UWA-Perth","wgCurRevisionId":97021,"wgRevisionId":97021,"wgArticleId":7265,"wgIsArticle":true,"wgIsRedirect":false,"wgAction":"view","wgUserName":null,"wgUserGroups":["*"],"wgCategories":[],"wgBreakFrames":false,"wgPageContentLanguage":"en","wgPageContentModel":"wikitext","wgSeparatorTransformTable":["",""],"wgDigitTransformTable":["",""],"wgDefaultDateFormat":"dmy","wgMonthNames":["","January","February","March","April","May","June","July","August","September","October","November","December"],"wgMonthNamesShort":["","Jan","Feb","Mar","Apr","May","Jun","Jul","Aug","Sep","Oct","Nov","Dec"],"wgRelevantPageName":"NA-MIC/Projects/Collaboration/UWA-Perth","wgRelevantArticleId":7265,"wgRequestId":"50f7d5a5e35e915a5239ff5f","wgCSPNonce":false,"wgIsProbablyEditable":false,"wgRelevantPageIsProbablyEditable":false,"wgRestrictionEdit":[],"wgRestrictionMove":[],"wgMediaViewerOnClick":true,"wgMediaViewerEnabledByDefault":true,"wgVisualEditor":{"pageLanguageCode":"en","pageLanguageDir":"ltr","pageVariantFallbacks":"en","usePageImages":false,"usePageDescriptions":false},"wgSmjSize":110,"wgSmjUseChem":true,"wgSmjInlineMath":[["[math]","[/math]"]],"wgVisualEditorToolbarScrollOffset":0,"wgVisualEditorUnsupportedEditParams":["undo","undoafter","veswitched"],"wgEditSubmitButtonLabelPublish":false});mw.loader.state({"site.styles":"ready","noscript":"ready","user.styles":"ready","user":"ready","user.options":"ready","user.tokens":"loading","mediawiki.legacy.shared":"ready","mediawiki.legacy.commonPrint":"ready","ext.visualEditor.desktopArticleTarget.noscript":"ready","mediawiki.skinning.interface":"ready","mediawiki.skinning.content.externallinks":"ready","skins.slicerneue.styles":"ready"});mw.loader.implement("user.tokens@0tffind",function($,jQuery,require,module){/*@nomin*/mw.user.tokens.set({"editToken":"+\\","patrolToken":"+\\","watchToken":"+\\","csrfToken":"+\\"});});RLPAGEMODULES=["ext.SmjCDN","ext.SmjCDN.mobile","site","mediawiki.page.startup","mediawiki.page.ready","mediawiki.searchSuggest","mmv.head","mmv.bootstrap.autostart","ext.visualEditor.desktopArticleTarget.init","ext.visualEditor.targetLoader"];mw.loader.load(RLPAGEMODULES);});NA-MIC/Projects/Collaboration/UWA-PerthFromNAMICWikiJumpto:navigation,searchHome<NA-MIC<Projects<Collaboration<UWA-PerthReturntoProjectWeekMainPageFlowchartofthefiniteelementalgorithmwithTotalLagrangeExplicitDynamics(TLED)forcomputingsoftorgandeformationdevelopedatISML.KeyInvestigatorsUWAKarolMiller,LabWebpagesAdamWittekGrandJoldesNAMICWillSchroederJimMillerStevePieperObjectiveTheIntelligentSystemsofMedicineLaboratory(ISML)missionistoworktowardsimprovingclinicaloutcomesthroughappropriateuseoftechnology.Weareinterestedinbiomechanics(bothengineeringbiomechanicsandsportbiomechanics),biomedicalengineering,computerintegratedsurgery,medicalroboticsandrelatedfields.Werunexcitingresearchprojectsintheseareas,generouslyfundedbyTheAustralianResearchCouncilandotheragencies(includingNIH).DetailedinformationabouttheISMLcanbefoundhere[1]Approach,PlanWeintendtocontributetoNa-MICbyprovidingalgorithmsforcomputingtheintra-operativebraindeformationsforimage-guidedneurosurgery.Wetreatthebrainshiftasacontinuummechanicsprobleminvolvingfinitedeformationsandsolveitusingnon-linearfiniteelementprocedures.Weuseprocedures(non-linearexplicitdynamicswithTotalLagrangianformulation)thatdonotrequiresolvinglargesystemsofequationsandarethereforeamenabletocomputingtheintra-operativebraindeformationsinrealtime(under150s)onastandardPC.Seealso[2]ProgressThealgorithmsarealreadyimplementedinC/C++usingVisualStudioandMFC.Matlabisusedforvisualizingtheresults.AttheProjectWeekLearnedfromJimMilleraboutpossiblesolutionsforlinkingourFiniteElement(FE)solverforcomputingsoftorgandeformationswithSlicer.Nodecisionregardingselectionofsuchsolutionhasbeenmade.Talkedwithothergroups(fromtheCollegeofWilliam&Mary,LaboratoryofNeuroImagingatUCLA,andtheUniversityofIowa)aboutapplyingtheFEanalysisincomputingsoftorgandeformationsforimageregistration.LearnedfromVincentMagnottaaboutthehexahedralmeshgeneratordevelopedattheUniversityofIowa.AttendedtheITKandNon-rigidRegistrationtopicbreak-outs.ReferencesForcompletelistofourpublicationvisithere[3][1]Miller,K.,Joldes,G.,Lance,D.,Wittek,A.(2007)TotalLagrangianexplicitdynamicsfiniteelementalgorithmforcomputingsofttissuedeformation,CommunicationsinNumericalMethodsinEngineering.Vol.23,pp.121-134,doi:10.1002/cnm.887,availableon-line[4].[2]Wittek,A.,Miller,K.,Kikinis,R.,Warfield,S.K.(2007)Patient-specificmodelofbraindeformation:Applicationtomedicalimageregistration.JournalofBiomechanics.Vol.40,pp.919-929,DOI:10.1016/j.jbiomech.2006.02.021,availableon-line[5].[3]Joldes,G.R.,Wittek,A.,Miller,K.(2007)Suiteoffiniteelementalgorithmsforaccuratecomputationofsofttissuedeformationforsurgicalsimulation,inProceedingsofComputationalBiomechanicsforMedicineWorkshop,InternationalConferenceonMedicalImageComputingandComputer-AssistedInterventionMICCAI2007,Brisbane,Australia,ISBN13:9780643095175,pp.65-73.[4]Hawkins,T.,Wittek,A.andMiller,K.(2006)Comparisonofconstitutivemodelsofbraintissuefornon-rigidimageregistration,inCDProceedingsof2ndWorkshoponComputerAssistedDiagnosisandSurgery,Santiago,Chile,4pages.[5]Horton,A.,Wittek,A.andK.Miller(2006)ComputersimulationofbrainshiftusinganelementfreeGalerkinmethod,inCDProceedingsof7thInternationalSymposiumonComputerMethodsinBiomechanicsandBiomedicalEngineeringCMBBE2006,Antibes,France,ISBN:0-9549670-2-X,pp.906-911.[6]Horton,A.,Wittek,A.andK.Miller(2006)Towardsmeshlessmethodsforsurgerysimulation.Linearversusnon-linearcomputationofthebrainshift,inProceedingsofComputationalBiomechanicsforMedicineWorkshop,InternationalConferenceonMedicalImageComputingandComputer-AssistedInterventionMICCAI2006,Copenhagen,Denmark,ISBN10:87-7611-149-0,pp.32-40,availableon-line[6].[7]Joldes,G.,Wittek,A.andMiller,K.(2006)Improvedlineartetrahedralelementforsurgerysimulation,inProceedingsofComputationalBiomechanicsforMedicineWorkshop,InternationalConferenceonMedicalImageComputingandComputer-AssistedInterventionMICCAI2006,Copenhagen,Denmark,ISBN10:87-7611-149-0,pp.52-63,availableon-line[7].[8]Joldes,G.,Wittek,A.andMiller,K.(2006)Towardsnon-linearfiniteelement,computationsinrealtime,inCDProceedingsof7thInternationalSymposiumonComputerMethodsinBiomechanicsandBiomedicalEngineeringCMBBE2006,Antibes,France,ISBN:0-9549670-2-X,pp.894-899.[9]Miller,K.,Joldes,G.andWittek,A.(2006)Newfiniteelementalgorithmforsurgicalsimulation,inCDProceedingsof2ndWorkshoponComputerAssistedDiagnosisandSurgery,Santiago,Chile,4pages[10]Miller,K.Hawkins,T.andWittek,A.(2006)Linearversusnon-linearcomputationofthebrainshift,inCDProceedingsofthe7thInternationalSymposiumonComputerMethodsinBiomechanicsandBiomedicalEngineeringCMBBE2006,Antibes,France,ISBN:0-9549670-2-X,pp.888-893.[11]Miller,K.andWittek,A.(2006)Neuroimageregistrationasdisplacement-zerotractionproblemofsolidmechanics,LeadLectureinProceedingsofComputationalBiomechanicsforMedicineWorkshop,InternationalConferenceonMedicalImageComputingandComputer-AssistedInterventionMICCAI2006,Copenhagen,Denmark,ISBN10:87-7611-149-0,pp.1-12,availableon-line[8].[12]Wittek,A.,Kikinis,K.,Warfield,S.K.,andMiller,K.(2005)Brainshiftcomputationusingafullynonlinearbiomechanicalmodel,inProceedingsof8thInternationalConferenceonMedicalImageComputingandComputerAssistedInterventionMICCAI2005inLectureNotesinComputerScience37502006,pp.583-590.InPress[13]Wittek,A.,T.Hawkins,andMiller,K.(2008).Ontheunimportanceofconstitutivemodelsincomputingbraindeformationforimage-guidedsurgery(inpress).BiomechanicsandModelinginMechanobiology:8pages,doi:10.1007/s10237-008-0118-1,Springer.[14]GrandJoldes,KarolMillerandAdamWittek(2007)EfficienthourglasscontrolimplementationforanuniformstrainhexahedrausingTotalLagrangianformulation.CommunicationsinNumericalMethodsinEngineering(acceptedinJune2007),9pages,doi:10.1002/cnm.1034,Wiley.Retrievedfrom"https://www.na-mic.org/w/index.php?title=NA-MIC/Projects/Collaboration/UWA-Perth&oldid=97021"NavigationmenuViewsPageDiscussionViewsourceHistoryPersonaltoolsLoginRequestaccountGeneralNA-MICWikiEventsProjectWeekEventsContactUsResourcesLinksRecentchangesSearch ToolsWhatlinkshereRelatedchangesSpecialpagesPrintableversionPermanentlinkPageinformationCitethispageThispagewaslasteditedon30June2017,at13:41.ContentisavailableunderCreativeCommonsAttribution-ShareAlikeunlessotherwisenoted.PrivacypolicyAboutNAMICWikiDisclaimers(window.RLQ=window.RLQ||[]).push(function(){mw.config.set({"wgPageParseReport":{"limitreport":{"cputime":"0.017","walltime":"0.019","ppvisitednodes":{"value":14,"limit":1000000},"ppgeneratednodes":{"value":30,"limit":1000000},"postexpandincludesize":{"value":0,"limit":2097152},"templateargumentsize":{"value":0,"limit":2097152},"expansiondepth":{"value":2,"limit":40},"expensivefunctioncount":{"value":0,"limit":100},"unstrip-depth":{"value":0,"limit":20},"unstrip-size":{"value":0,"limit":5000000},"timingprofile":["100.00%0.0001-total"]},"cachereport":{"timestamp":"20230606160420","ttl":86400,"transientcontent":false}}});mw.config.set({"wgBackendResponseTime":62});});